Latest Research

A microfluidic platform facilitates high-throughput mechanical testing of single molecules

Abstract

“Current approaches for single molecule force spectroscopy are typically constrained by low throughput and high instrumentation cost. Herein, a low-cost, high throughput technique is demonstrated using microfluidics for multiplexed mechanical manipulation of up to ~4000 individual molecules via molecular fluid loading on-a-chip (FLO-Chip). The FLO-Chip consists of serially connected microchannels with varying width, allowing for simultaneous testing at multiple loading rates. Molecular force measurements are demonstrated by dissociating Biotin-Streptavidin and Digoxigenin-AntiDigoxigenin interactions along with unzipping of double stranded DNA of varying sequence under different dynamic loading rates and solution conditions. Rupture force results under varying loading rates and solution conditions are in good agreement with prior studies, verifying a versatile approach for single molecule biophysics and molecular mechanobiology. FLO-Chip enables straightforward, rapid, low-cost, and portable mechanical testing of single molecules that can be implemented on a wide range of microscopes to broaden access and may enable new applications of molecular force spectroscopy.

AB Schematic and representative photograph of the microfluidic platform used in fluid loading on a chip (FLO-Chip). C (i) Schematic, and (ii) Differential Interference Contrast (DIC) image of beads anchored to the coverslip via a single dsDNA tether. Application of flow causes ~2.6μm displacement of the bead center as the result of the drag force applied on the bead. Scale bars, 2 μm. D (i) Schematic of the direction of in-plane and off-plane stretching force (F) applied on a tether bead under flow. Application of F leads to transverse fluctuation of the tethered bead. (ii) Calibration of F with respect to the inlet perfusion rate (Q) in the 1500 μm and 2500 μm wide microchannel. Transverse fluctuation of n = 33 beads in the 2500 µm wide channel and n = 23 beads in the 1500 µm wide channel were monitored over three independent experiments under different flow rates. Error bars represent standard deviation. The calibration line (red dash line) indicated a linear relationship between drag force and perfusion rate with slope of ~1.4 ± 0.2 pN s mm−1. Error bars represent standard deviation. (iii) Force-extension examination of single tethers under varying F. The tether length (l) was well described according to the worm-like chain model (solid red line, persistence length = 56 ± 8 nm, contour length = 1.8 ± 0.1 µm). Black arrowheads denote flow direction. Scale bars are 2 μm. Source data are provided as a Source Data file.” Reproduced under a Creative Commons Attribution 4.0 International License from Akbari, E., Shahhosseini, M., Robbins, A. et al. Low cost and massively parallel force spectroscopy with fluid loading on a chip. Nat Commun 13, 6800 (2022). 


Figures and the abstract are reproduced from
Akbari, E., Shahhosseini, M., Robbins, A. et al. Low cost and massively parallel force spectroscopy with fluid loading on a chip. Nat Commun 13, 6800 (2022). https://doi.org/10.1038/s41467-022-34212-w under a Creative Commons Attribution 4.0 International License.


Read the original article:
Low cost and massively parallel force spectroscopy with fluid loading on a chip

Pouriya Bayat

Published by
Pouriya Bayat

Recent Posts

Advances in High-Accuracy, High-Throughput Droplet Microfluidic Sorting Using Dual Fluorescence and Size-Based Selection

In droplet microfluidics, high-throughput screening is critical for analyzing large cellular or molecular libraries at…

November 6, 2024

Microfluidically Engineered Hydrogel Beads for Complex Protein Characterization

In the ever-evolving landscape of biochemical research, protein complexes characterization plays an important role in…

October 19, 2024

Advancements in Protein Sizing with Single-Molecule Microfluidic Diffusional Sizing

Understanding of a protein’s true behavior in biological systems remains a cornerstone for understanding biological…

September 14, 2024

Exploring the Stability of Tumor-on-a-Chip Models with Polydopamine Coatings

Pancreatic cancer, notorious for its poor prognosis and rapid progression, remains a significant challenge in…

August 31, 2024

Microfluidic Platform for Monitoring Microglial Dynamics in Neuroinflammatory Conditions

Understanding how microglia, the brain's immune cells, respond to inflammation is pivotal for grasping the…

August 19, 2024

Advancing Nanoparticle Design: Microfluidic Synthesis of Complex Liposomes

Recent advancements in microfabrication of microfluidic chips are pushing the boundaries of nanoparticle design, offering…

July 29, 2024